Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJAG_00354 | SJAG_00935 | B6JVE6 | B6JX09 | Uncharacterized protein. | Uncharacterized protein. | 0.681 |
SJAG_00354 | SJAG_01044 | B6JVE6 | B6JXB7 | Uncharacterized protein. | Holliday junction resolvase subunit Mus81. | 0.702 |
SJAG_00354 | SJAG_01698 | B6JVE6 | B6JYN2 | Uncharacterized protein. | Single-stranded DNA binding protein Ssb2. | 0.791 |
SJAG_00354 | SJAG_02258 | B6JVE6 | B6K1Z5 | Uncharacterized protein. | Transmembrane receptor Wsc1. | 0.681 |
SJAG_00354 | SJAG_02556 | B6JVE6 | B6K0K0 | Uncharacterized protein. | DNA repair endonuclease XPF. | 0.749 |
SJAG_00354 | SJAG_02718 | B6JVE6 | B6K100 | Uncharacterized protein. | Glucan endo-1,3-alpha-glucosidase Agn2. | 0.681 |
SJAG_00354 | SJAG_03444 | B6JVE6 | B6K491 | Uncharacterized protein. | Glucan endo-1,3-alpha-glucosidase Agn1. | 0.681 |
SJAG_00354 | SJAG_03855 | B6JVE6 | B6K586 | Uncharacterized protein. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.792 |
SJAG_00354 | SJAG_03867 | B6JVE6 | B6K598 | Uncharacterized protein. | Kinetochore protein Mis16. | 0.679 |
SJAG_00354 | SJAG_04297 | B6JVE6 | B6K6G6 | Uncharacterized protein. | Sulfonate dioxygenase. | 0.681 |
SJAG_00935 | SJAG_00354 | B6JX09 | B6JVE6 | Uncharacterized protein. | Uncharacterized protein. | 0.681 |
SJAG_00935 | SJAG_01044 | B6JX09 | B6JXB7 | Uncharacterized protein. | Holliday junction resolvase subunit Mus81. | 0.753 |
SJAG_00935 | SJAG_01698 | B6JX09 | B6JYN2 | Uncharacterized protein. | Single-stranded DNA binding protein Ssb2. | 0.740 |
SJAG_00935 | SJAG_02556 | B6JX09 | B6K0K0 | Uncharacterized protein. | DNA repair endonuclease XPF. | 0.769 |
SJAG_00935 | SJAG_03855 | B6JX09 | B6K586 | Uncharacterized protein. | Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism. | 0.761 |
SJAG_01044 | SJAG_00354 | B6JXB7 | B6JVE6 | Holliday junction resolvase subunit Mus81. | Uncharacterized protein. | 0.702 |
SJAG_01044 | SJAG_00935 | B6JXB7 | B6JX09 | Holliday junction resolvase subunit Mus81. | Uncharacterized protein. | 0.753 |
SJAG_01044 | SJAG_01698 | B6JXB7 | B6JYN2 | Holliday junction resolvase subunit Mus81. | Single-stranded DNA binding protein Ssb2. | 0.821 |
SJAG_01044 | SJAG_02258 | B6JXB7 | B6K1Z5 | Holliday junction resolvase subunit Mus81. | Transmembrane receptor Wsc1. | 0.753 |
SJAG_01044 | SJAG_02556 | B6JXB7 | B6K0K0 | Holliday junction resolvase subunit Mus81. | DNA repair endonuclease XPF. | 0.933 |
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