STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_00354Uncharacterized protein. (325 aa)    
Predicted Functional Partners:
SJAG_03855
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.792
SJAG_01698
Single-stranded DNA binding protein Ssb2.
   
 0.791
SJAG_02556
DNA repair endonuclease XPF.
    
 0.749
SJAG_01044
Holliday junction resolvase subunit Mus81.
    
  0.702
SJAG_00935
Uncharacterized protein.
    
 0.681
SJAG_02718
Glucan endo-1,3-alpha-glucosidase Agn2.
    
 0.681
SJAG_02258
Transmembrane receptor Wsc1.
    
 0.681
SJAG_03444
Glucan endo-1,3-alpha-glucosidase Agn1.
    
 0.681
SJAG_04297
Sulfonate dioxygenase.
    
 0.681
SJAG_03867
Kinetochore protein Mis16.
    
 0.679
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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