STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_00430GTPase Ypt2. (200 aa)    
Predicted Functional Partners:
SJAG_04343
GTPase Ypt4.
  
0.999
SJAG_02368
Guanyl-nucleotide exchange factor Sec2.
    
 0.965
SJAG_02422
Rab GDP dissociation inhibitor; Belongs to the Rab GDI family.
   
 0.947
SJAG_02640
GTPase Ypt1.
  
0.911
SJAG_03864
Exocyst complex component SEC15; Component of the exocyst complex involved in the docking of exocytic vesicles with fusion sites on the plasma membrane.
    
 0.869
SJAG_02063
Rab geranylgeranyltransferase escort protein.
   
 0.858
SJAG_02320
Exocyst complex subunit Sec8.
    
 0.857
SJAG_05210
Autophagy associated protein Aut12.
    
 0.854
SJAG_01925
Exocyst complex subunit Sec6.
    
 0.848
SJAG_04960
Exocyst complex protein EXO70; Involved in the secretory pathway as part of the exocyst complex which tethers secretory vesicles to the sites of exocytosis. Also plays a role in the assembly of the exocyst. Belongs to the EXO70 family.
    
 0.840
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.