Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJAG_00306 | SJAG_00344 | B6JV99 | B6JVD7 | RNase P subunit Rpr2. | Ribosome biogenesis protein Tsr1. | 0.999 |
SJAG_00306 | SJAG_00897 | B6JV99 | B6JWX2 | RNase P subunit Rpr2. | Bystin family U3 and U14 snoRNA associated protein. | 0.999 |
SJAG_00306 | SJAG_00955 | B6JV99 | B6JX28 | RNase P subunit Rpr2. | RNase P subunit. | 0.999 |
SJAG_00306 | SJAG_01338 | B6JV99 | B6K0E4 | RNase P subunit Rpr2. | Ribosome biogenesis protein Ltv1. | 0.999 |
SJAG_00306 | SJAG_01618 | B6JV99 | B6JYF6 | RNase P subunit Rpr2. | Atypical/RIO/RIO2 protein kinase. | 0.999 |
SJAG_00306 | SJAG_03254 | B6JV99 | B6K3R3 | RNase P subunit Rpr2. | 40S ribosomal protein S29. | 0.999 |
SJAG_00306 | SJAG_03539 | B6JV99 | B6K4H8 | RNase P subunit Rpr2. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.999 |
SJAG_00306 | rps0a | B6JV99 | B6K180 | RNase P subunit Rpr2. | 40S ribosomal protein S0-A; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. | 0.999 |
SJAG_00344 | SJAG_00306 | B6JVD7 | B6JV99 | Ribosome biogenesis protein Tsr1. | RNase P subunit Rpr2. | 0.999 |
SJAG_00344 | SJAG_00897 | B6JVD7 | B6JWX2 | Ribosome biogenesis protein Tsr1. | Bystin family U3 and U14 snoRNA associated protein. | 0.999 |
SJAG_00344 | SJAG_00955 | B6JVD7 | B6JX28 | Ribosome biogenesis protein Tsr1. | RNase P subunit. | 0.999 |
SJAG_00344 | SJAG_01338 | B6JVD7 | B6K0E4 | Ribosome biogenesis protein Tsr1. | Ribosome biogenesis protein Ltv1. | 0.999 |
SJAG_00344 | SJAG_01366 | B6JVD7 | B6K0H3 | Ribosome biogenesis protein Tsr1. | 40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family. | 0.999 |
SJAG_00344 | SJAG_01618 | B6JVD7 | B6JYF6 | Ribosome biogenesis protein Tsr1. | Atypical/RIO/RIO2 protein kinase. | 0.999 |
SJAG_00344 | SJAG_02046 | B6JVD7 | B6JZK6 | Ribosome biogenesis protein Tsr1. | 40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family. | 0.999 |
SJAG_00344 | SJAG_03254 | B6JVD7 | B6K3R3 | Ribosome biogenesis protein Tsr1. | 40S ribosomal protein S29. | 0.999 |
SJAG_00344 | SJAG_03539 | B6JVD7 | B6K4H8 | Ribosome biogenesis protein Tsr1. | 20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family. | 0.999 |
SJAG_00344 | rps0a | B6JVD7 | B6K180 | Ribosome biogenesis protein Tsr1. | 40S ribosomal protein S0-A; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits. | 0.999 |
SJAG_00897 | SJAG_00306 | B6JWX2 | B6JV99 | Bystin family U3 and U14 snoRNA associated protein. | RNase P subunit Rpr2. | 0.999 |
SJAG_00897 | SJAG_00344 | B6JWX2 | B6JVD7 | Bystin family U3 and U14 snoRNA associated protein. | Ribosome biogenesis protein Tsr1. | 0.999 |
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