STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_01057Sphingolipid delta(4)-desaturase; Delta(4)-fatty-acid desaturase which introduces a double bond at the 4-position in the long-chain base (LCB) of ceramides. (349 aa)    
Predicted Functional Partners:
SJAG_02842
Sphingosine N-acyltransferase Lac1.
    
 0.953
SJAG_01219
Inositol phosphosphingolipid phospholipase C.
     
 0.948
SJAG_02488
Pig-F.
   
 
 0.929
SJAG_02429
Sphingoid long chain base kinase.
    
 0.928
SJAG_02085
Sphingosine N-acyltransferase Lag1.
    
 0.919
SJAG_04986
Sphingosine-1-phosphate phosphatase.
     
 0.903
SJAG_05311
Sphingosine hydroxylase; Belongs to the sterol desaturase family.
   
 
 0.891
SJAG_00830
Threonine dehydratase.
   
 
 0.772
SJAG_04883
Phosphatidate cytidylyltransferase Ptp4.
      
 0.730
SJAG_02305
Serine palmitoyltransferase Lcb2.
   
  
 0.728
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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