STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_00125PPPDE peptidase family protein. (203 aa)    
Predicted Functional Partners:
SJAG_02992
19S proteasome regulatory subunit Rpn10.
    
   0.831
SJAG_00712
19S proteasome regulatory subunit Rpt2; Belongs to the AAA ATPase family.
    
   0.822
SJAG_00738
19S proteasome regulatory subunit Rpn6.
    
   0.822
SJAG_00808
Proteasome subunit alpha type.
    
   0.822
SJAG_00128
Proteasome subunit beta.
    
   0.822
SJAG_01489
19S proteasome regulatory subunit Rpt1; Belongs to the AAA ATPase family.
    
   0.822
SJAG_01544
19S proteasome regulatory subunit Rpt5; Belongs to the AAA ATPase family.
    
   0.822
SJAG_01131
19S proteasome regulatory subunit Rpt6; Belongs to the AAA ATPase family.
    
   0.822
SJAG_01203
19S proteasome regulatory subunit Rpn12.
    
   0.822
SJAG_02562
Proteasome subunit alpha type.
    
   0.822
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.