STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_01206Uncharacterized protein. (149 aa)    
Predicted Functional Partners:
SJAG_02828
DNA repair endonuclease Swi10.
   
 0.846
SJAG_02556
DNA repair endonuclease XPF.
    
 0.840
SJAG_01134
Cdc48-Npl4-Ufd1 complex component Npl4.
    
 0.836
SJAG_01449
GTP-binding nuclear protein; GTP-binding protein involved in nucleocytoplasmic transport. Required for the import of protein into the nucleus and also for RNA export. Involved in chromatin condensation and control of cell cycle. Belongs to the small GTPase superfamily. Ran family.
   
 
 0.832
SJAG_02531
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.804
SJAG_03122
Ribosomal protein; Belongs to the universal ribosomal protein uL1 family.
   
 0.804
SJAG_03855
Replication protein A subunit; As part of the replication protein A (RPA/RP-A), a single- stranded DNA-binding heterotrimeric complex, may play an essential role in DNA replication, recombination and repair. Binds and stabilizes single-stranded DNA intermediates, preventing complementary DNA reannealing and recruiting different proteins involved in DNA metabolism.
    
 0.785
SJAG_01044
Holliday junction resolvase subunit Mus81.
    
 0.779
SJAG_02690
ATP-dependent 3' to 5' DNA helicase.
    
 0.761
SJAG_02294
ATP-dependent DNA helicase.
    
 0.761
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.