STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_01215Tubulin gamma chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles or the centrosome. (446 aa)    
Predicted Functional Partners:
SJAG_02609
Spindle pole body component.
   
 0.996
SJAG_03835
Spindle pole body component.
   
 0.996
SJAG_00856
Spindle pole body component.
    
 0.971
SJAG_00918
DASH complex subunit Ask1.
   
 0.948
SJAG_00847
PPR repeat protein.
   
 0.776
SJAG_00974
Spore wall assembly protein.
   
 0.776
SJAG_01882
PPR repeat protein.
   
 0.776
SJAG_01249
Translation regulator.
   
 0.776
dmr1
Mitochondrial group I intron splicing factor dmr1; RNA-binding protein involved in the specific removal of group I introns in mitochondrial encoded transcripts. Maintains the stability of the small subunit mitochondrial 15S rRNA and thus the expression of the mitochondrial genome (By similarity); Belongs to the CCM1 family.
   
 0.776
SJAG_03674
ATPase expression protein.
   
 0.776
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.