STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_0129640S ribosomal protein S19. (144 aa)    
Predicted Functional Partners:
SJAG_02704
AAA family ATPase ELf1.
   
   0.994
SJAG_02738
Translation elongation factor eEF3.
   
 
 0.993
SJAG_00468
40S ribosomal protein S24; Belongs to the eukaryotic ribosomal protein eS24 family.
   
 0.989
SJAG_01366
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
   
 0.989
SJAG_03254
40S ribosomal protein S29.
   
 0.989
SJAG_04324
40S ribosomal protein S4; Belongs to the eukaryotic ribosomal protein eS4 family.
   
 0.989
SJAG_04475
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
   
 0.989
SJAG_04476
40S ribosomal protein S20.
   
 0.989
SJAG_04672
40S ribosomal protein S25; Belongs to the eukaryotic ribosomal protein eS25 family.
   
 0.989
SJAG_04814
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 0.989
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.