STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_01362NADP-dependent leukotriene B4 12-hydroxydehydrogenase. (354 aa)    
Predicted Functional Partners:
SJAG_02010
Glucose 1-dehydrogenase.
   
 
 0.473
SJAG_04843
Fumarate hydratase.
   
  0.437
SJAG_01869
NADH/NADPH dependent indole-3-acetaldehyde reductase AKR3C2.
   
 
 0.426
SJAG_03958
Xylose and arabinose reductase.
   
 
 0.426
SJAG_04660
Xylose and arabinose reductase.
   
 
 0.426
SJAG_03494
Glutamate-cysteine ligase regulatory subunit.
   
 
 0.421
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.