STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_02727Trp-like ion channel. (622 aa)    
Predicted Functional Partners:
SJAG_01090
Trp-like ion channel.
  
 
 0.928
SJAG_02728
Fungal protein.
    
 
 0.738
SJAG_01831
Structural maintenance of chromosomes protein.
    
 0.673
SJAG_02877
Calcium channel regulatory subunit Yam8.
    
 0.668
SJAG_00349
Clr6 histone deacetylase complex subunit Alp13.
    
 0.654
SJAG_05229
Calcium channel Cch1.
    
 0.649
SJAG_03219
SCF ubiquitin ligase complex subunit Skp1; Belongs to the SKP1 family.
    
 0.642
SJAG_02542
Separase/separin.
    
  0.641
SJAG_01685
Peroxin Pex32.
    
 0.634
SJAG_01722
Sterol binding ankyrin repeat protein; Belongs to the OSBP family.
   
 0.607
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.