STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_02789Endocytosis regulator. (387 aa)    
Predicted Functional Partners:
SJAG_01360
HECT-type ubiquitin-protein ligase Pub2.
    
 
 0.605
SJAG_03970
E3 ubiquitin-protein ligase.
    
 
 0.605
SJAG_04600
E3 ubiquitin-protein ligase.
    
 
 0.605
SJAG_03546
Transcription factor tfiiic complex subunit sfc9.
    
 
 0.576
SJAG_01388
Cell polarity factor Rax2.
    
 
 0.517
SJAG_00032
Arrestin Aly1.
 
 
 
 0.476
SJAG_03643
Arrestin Aly1.
 
 
 
 0.460
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.