STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_02227G10 protein. (146 aa)    
Predicted Functional Partners:
SJAG_00414
GTPase Cwf10.
   
 0.999
SJAG_00639
Splicing factor Prp17.
    
 0.999
SJAG_00859
Complexed with Cdc5 protein Cwf3.
    
 0.999
SJAG_00911
Complexed with Cdc5 protein Cwf4.
    
 0.999
SJAG_01408
Cell division control protein Cdc5.
    
 0.999
SJAG_02722
Complexed with Cdc5 protein Cwf11.
    
 0.999
SJAG_03687
Splicing factor Prp45.
    
 0.999
SJAG_04117
RNA-binding protein Cwf5.
   
 0.999
SJAG_04783
Ubiquitin-protein ligase E4.
    
 0.999
SJAG_04898
RNA-binding protein Cwf2.
    
 0.999
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.