STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_02381RNA-binding protein. (686 aa)    
Predicted Functional Partners:
SJAG_03794
DNAJ domain-containing protein Psi1.
    
 
 0.633
SJAG_02287
RNA helicase.
   
  
 0.587
SJAG_02704
AAA family ATPase ELf1.
   
  
 0.561
SJAG_00436
DNAJ domain-containing protein Mas5.
    
 
 0.524
SJAG_04863
Single-stranded telomeric binding protein Tgc1.
   
 
 0.523
SJAG_02554
RNA-binding protein Scw1.
   
 
 0.490
SJAG_00879
U3 snoRNP protein Utp4.
   
  
 0.479
SJAG_04407
CCR4-Not complex CAF1 family ribonulcease subunit Caf1.
    
   0.438
SJAG_00245
U3 snoRNP-associated protein Utp21.
   
    0.434
SJAG_00572
U3 snoRNP-associated protein Utp1.
   
    0.434
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.