STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_03300Medial ring protein Alm1. (1680 aa)    
Predicted Functional Partners:
SJAG_00375
Nucleoporin Nup184.
    
 0.999
SJAG_02424
Nucleoporin Seh1; Belongs to the WD repeat SEC13 family.
    
 0.999
SJAG_03103
Nuclear rim protein Amo1.
    
 0.999
SJAG_03200
Spindle pole body docking protein Cut11.
    
 0.999
SJAG_03299
Nucleoporin Nup189.
   
 0.999
SJAG_04379
RNA export factor Rae1.
    
 0.999
SJAG_04645
Nuclear pore complex associated protein.
     
0.897
SJAG_04148
Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC).
    
 0.831
SJAG_03729
Nucleoporin Nup124.
   
 0.826
SJAG_00178
mRNA export receptor.
   
 0.825
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.