STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_03356RNA-dependent RNA polymerase. (1213 aa)    
Predicted Functional Partners:
SJAG_02725
Poly(A) polymerase Cid12.
    
 0.976
SJAG_03689
Uncharacterized protein; Belongs to the helicase family. Dicer subfamily.
    
 
 0.946
SJAG_03193
Helicase Required for RNAi-mediated heterochromatin assembly Hrr1.
    
 0.903
SJAG_02621
Uncharacterized protein; Belongs to the argonaute family.
    
 
 0.878
SJAG_03916
Chromodomain protein Chp1.
    
 
 0.826
SJAG_03042
RITS complex subunit 3.
    
 
 0.825
SJAG_04574
Histone-lysine N-methyltransferase; Belongs to the class V-like SAM-binding methyltransferase superfamily. Histone-lysine methyltransferase family. Suvar3-9 subfamily.
    
 
 0.813
SJAG_01601
Chromodomain protein Swi6.
    
 
 0.812
SJAG_03680
Silencing protein Rik1.
    
 
 0.687
SJAG_01176
Poly(A) polymerase Cid14.
    
 
 0.666
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.