STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_03634Dymeclin 2. (708 aa)    
Predicted Functional Partners:
SJAG_00573
Ubiquitin carboxyl-terminal hydrolase; Belongs to the peptidase C19 family.
    
 
 0.544
SJAG_03686
Ubiquitin carboxyl-terminal hydrolase.
    
 
 0.544
SJAG_03200
Spindle pole body docking protein Cut11.
    
 
 0.528
SJAG_00375
Nucleoporin Nup184.
    
 
 0.496
SJAG_03847
RNA export factor Gle1.
   
 
 0.469
SJAG_00479
Ribosomal export complex protein Arx1.
    
   0.465
SJAG_02757
Nucleoporin Nup157/170.
    
 
 0.453
SJAG_00178
mRNA export receptor.
    
 
 0.449
SJAG_02210
Nucleoporin Nup44.
    
 
 0.432
SJAG_01528
Ubiquitin carboxy terminal hydrolase Ubp2; Belongs to the peptidase C19 family.
    
 
 0.421
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.