STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_03684Signal recognition particle 54 kDa protein; Binds to the signal sequence of presecretory protein when they emerge from the ribosomes and transfers them to TRAM (translocating chain-associating membrane protein). Belongs to the GTP-binding SRP family. SRP54 subfamily. (537 aa)    
Predicted Functional Partners:
SJAG_01759
Signal recognition particle subunit SRP68; Signal-recognition-particle assembly has a crucial role in targeting secretory proteins to the rough endoplasmic reticulum membrane; Belongs to the SRP68 family.
    
 0.999
SJAG_01840
Signal recognition particle subunit Srp72.
   
 0.999
SJAG_01282
Signal recognition particle subunit Srp14.
    
 0.999
SJAG_02456
Signal recognition particle subunit Sec65.
   
 0.999
SJAG_03411
Signal recognition particle subunit Srp21.
   
 0.999
SJAG_01558
Signal recognition particle receptor alpha subunit Srp101.
 
0.994
SJAG_00921
60S ribosomal protein L26.
  
 0.975
SJAG_00749
60S ribosomal protein L35.
   
 
 0.974
SJAG_04814
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
   
 
 0.923
SJAG_01473
Ribosomal protein subunit L19.
   
 
 0.916
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.