Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJAG_00252 | SJAG_01383 | B6JV50 | B6JXS2 | Pyridoxine-pyridoxal-pyridoxamine kinase. | Pyridoxine-pyridoxal-pyridoxamine kinase. | 0.942 |
SJAG_00252 | SJAG_01881 | B6JV50 | B6JZ57 | Pyridoxine-pyridoxal-pyridoxamine kinase. | Pyridoxamine 5'-phosphate oxidase. | 0.917 |
SJAG_00252 | SJAG_03821 | B6JV50 | B6K554 | Pyridoxine-pyridoxal-pyridoxamine kinase. | Aldo_ket_red domain-containing protein. | 0.790 |
SJAG_00471 | SJAG_02424 | B6JVQ6 | B6K2F5 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | Nucleoporin Seh1; Belongs to the WD repeat SEC13 family. | 0.999 |
SJAG_00471 | SJAG_03821 | B6JVQ6 | B6K554 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | Aldo_ket_red domain-containing protein. | 0.743 |
SJAG_00471 | SJAG_03907 | B6JVQ6 | B6K5D5 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | COPII-coated vesicle component Sec13; Belongs to the WD repeat SEC13 family. | 0.999 |
SJAG_00471 | SJAG_04148 | B6JVQ6 | B6K619 | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.999 |
SJAG_01194 | SJAG_03821 | B6K006 | B6K554 | Ribosomal protein L37; Binds to the 23S rRNA. | Aldo_ket_red domain-containing protein. | 0.743 |
SJAG_01383 | SJAG_00252 | B6JXS2 | B6JV50 | Pyridoxine-pyridoxal-pyridoxamine kinase. | Pyridoxine-pyridoxal-pyridoxamine kinase. | 0.942 |
SJAG_01383 | SJAG_01881 | B6JXS2 | B6JZ57 | Pyridoxine-pyridoxal-pyridoxamine kinase. | Pyridoxamine 5'-phosphate oxidase. | 0.917 |
SJAG_01383 | SJAG_03821 | B6JXS2 | B6K554 | Pyridoxine-pyridoxal-pyridoxamine kinase. | Aldo_ket_red domain-containing protein. | 0.790 |
SJAG_01881 | SJAG_00252 | B6JZ57 | B6JV50 | Pyridoxamine 5'-phosphate oxidase. | Pyridoxine-pyridoxal-pyridoxamine kinase. | 0.917 |
SJAG_01881 | SJAG_01383 | B6JZ57 | B6JXS2 | Pyridoxamine 5'-phosphate oxidase. | Pyridoxine-pyridoxal-pyridoxamine kinase. | 0.917 |
SJAG_01881 | SJAG_03821 | B6JZ57 | B6K554 | Pyridoxamine 5'-phosphate oxidase. | Aldo_ket_red domain-containing protein. | 0.793 |
SJAG_02010 | SJAG_03821 | B6JZH0 | B6K554 | Glucose 1-dehydrogenase. | Aldo_ket_red domain-containing protein. | 0.860 |
SJAG_02010 | SJAG_05007 | B6JZH0 | B6K8C9 | Glucose 1-dehydrogenase. | Tryptophan synthase. | 0.869 |
SJAG_02424 | SJAG_00471 | B6K2F5 | B6JVQ6 | Nucleoporin Seh1; Belongs to the WD repeat SEC13 family. | Nuclear pore complex protein Nup85; Functions as a component of the nuclear pore complex (NPC). | 0.999 |
SJAG_02424 | SJAG_03821 | B6K2F5 | B6K554 | Nucleoporin Seh1; Belongs to the WD repeat SEC13 family. | Aldo_ket_red domain-containing protein. | 0.745 |
SJAG_02424 | SJAG_03907 | B6K2F5 | B6K5D5 | Nucleoporin Seh1; Belongs to the WD repeat SEC13 family. | COPII-coated vesicle component Sec13; Belongs to the WD repeat SEC13 family. | 0.999 |
SJAG_02424 | SJAG_04148 | B6K2F5 | B6K619 | Nucleoporin Seh1; Belongs to the WD repeat SEC13 family. | Nuclear pore complex protein; Functions as a component of the nuclear pore complex (NPC). | 0.999 |
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