STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_03827Tryptophan permease. (582 aa)    
Predicted Functional Partners:
SJAG_01090
Trp-like ion channel.
    
 0.635
SJAG_01455
Anthranilate synthase component II.
   
 
 0.621
aro1
3-phosphoshikimate 1-carboxyvinyltransferase; The AROM polypeptide catalyzes 5 consecutive enzymatic reactions in prechorismate polyaromatic amino acid biosynthesis. In the N-terminal section; belongs to the sugar phosphate cyclases superfamily. Dehydroquinate synthase family. In the 3rd section; belongs to the shikimate kinase family. In the C-terminal section; belongs to the shikimate dehydrogenase family.
   
 0.604
SJAG_00096
Alpha-amylase.
   
 0.547
SJAG_00485
Alpha-amylase.
   
 0.547
SJAG_01028
Cell wall alpha-1,3-glucan synthase mok11.
   
 0.547
SJAG_01029
Alpha-amylase Aah2.
   
 0.547
SJAG_02916
Alpha-1,4-glucan synthase Ags1.
   
 0.547
SJAG_02435
Alpha-amylase Mde5.
   
 0.547
SJAG_03057
Alpha-1,3-glucan synthase Mok12.
   
 0.547
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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