Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ERB1 | SJAG_00083 | B6K1A5 | B6JUY4 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.871 |
ERB1 | SJAG_00744 | B6K1A5 | B6JWG8 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | U3 snoRNP protein Nop58. | 0.968 |
ERB1 | SJAG_02417 | B6K1A5 | B6K2E9 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.990 |
ERB1 | SJAG_03905 | B6K1A5 | B6K5D3 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | FK506-binding protein. | 0.764 |
ERB1 | SJAG_04108 | B6K1A5 | B6K5Y2 | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | Brix domain-containing protein Rpf2. | 0.988 |
SJAG_00083 | ERB1 | B6JUY4 | B6K1A5 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.871 |
SJAG_00083 | SJAG_00744 | B6JUY4 | B6JWG8 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | U3 snoRNP protein Nop58. | 0.993 |
SJAG_00083 | SJAG_01664 | B6JUY4 | B6JYK3 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | Hsp90-like protein. | 0.464 |
SJAG_00083 | SJAG_02417 | B6JUY4 | B6K2E9 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.814 |
SJAG_00083 | SJAG_03905 | B6JUY4 | B6K5D3 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | FK506-binding protein. | 0.717 |
SJAG_00083 | SJAG_04108 | B6JUY4 | B6K5Y2 | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | Brix domain-containing protein Rpf2. | 0.962 |
SJAG_00744 | ERB1 | B6JWG8 | B6K1A5 | U3 snoRNP protein Nop58. | Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome. | 0.968 |
SJAG_00744 | SJAG_00083 | B6JWG8 | B6JUY4 | U3 snoRNP protein Nop58. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.993 |
SJAG_00744 | SJAG_02417 | B6JWG8 | B6K2E9 | U3 snoRNP protein Nop58. | RNA methyltransferase Nop2; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family. | 0.968 |
SJAG_00744 | SJAG_03905 | B6JWG8 | B6K5D3 | U3 snoRNP protein Nop58. | FK506-binding protein. | 0.784 |
SJAG_00744 | SJAG_04108 | B6JWG8 | B6K5Y2 | U3 snoRNP protein Nop58. | Brix domain-containing protein Rpf2. | 0.894 |
SJAG_00991 | SJAG_03784 | B6JX63 | B6K518 | Hamartin. | CS domain-containing protein. | 0.948 |
SJAG_00991 | SJAG_03905 | B6JX63 | B6K5D3 | Hamartin. | FK506-binding protein. | 0.775 |
SJAG_01664 | SJAG_00083 | B6JYK3 | B6JUY4 | Hsp90-like protein. | Ribonucloprotein; Common component of the spliceosome and rRNA processing machinery; Belongs to the eukaryotic ribosomal protein eL8 family. | 0.464 |
SJAG_01664 | SJAG_03784 | B6JYK3 | B6K518 | Hsp90-like protein. | CS domain-containing protein. | 0.970 |
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