Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SJAG_00456 | SJAG_01064 | B6JVP1 | B6JXD6 | Uncharacterized protein. | Nuclear cap-binding protein subunit 2. | 0.641 |
SJAG_00456 | SJAG_02382 | B6JVP1 | B6K2B4 | Uncharacterized protein. | ATP-dependent RNA helicase DOB1. | 0.767 |
SJAG_00456 | SJAG_02622 | B6JVP1 | B6K0R3 | Uncharacterized protein. | YTH family protein Mmi1. | 0.800 |
SJAG_00456 | SJAG_02720 | B6JVP1 | B6K102 | Uncharacterized protein. | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | 0.641 |
SJAG_00456 | SJAG_03939 | B6JVP1 | B6K5G4 | Uncharacterized protein. | RNA-binding protein. | 0.900 |
SJAG_00456 | SJAG_04360 | B6JVP1 | B6K6M4 | Uncharacterized protein. | Nuclear cap-binding complex large subunit. | 0.640 |
SJAG_00456 | SJAG_04601 | B6JVP1 | B6K794 | Uncharacterized protein. | Poly(A) binding protein Pab2. | 0.859 |
SJAG_00456 | SJAG_04768 | B6JVP1 | B6K7Q2 | Uncharacterized protein. | zf-C3H1 domain-containing protein. | 0.682 |
SJAG_01064 | SJAG_00456 | B6JXD6 | B6JVP1 | Nuclear cap-binding protein subunit 2. | Uncharacterized protein. | 0.641 |
SJAG_01064 | SJAG_02382 | B6JXD6 | B6K2B4 | Nuclear cap-binding protein subunit 2. | ATP-dependent RNA helicase DOB1. | 0.659 |
SJAG_01064 | SJAG_02720 | B6JXD6 | B6K102 | Nuclear cap-binding protein subunit 2. | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | 0.842 |
SJAG_01064 | SJAG_03939 | B6JXD6 | B6K5G4 | Nuclear cap-binding protein subunit 2. | RNA-binding protein. | 0.586 |
SJAG_01064 | SJAG_04118 | B6JXD6 | B6K5Z2 | Nuclear cap-binding protein subunit 2. | Ski complex RNA helicase Ski2. | 0.544 |
SJAG_01064 | SJAG_04360 | B6JXD6 | B6K6M4 | Nuclear cap-binding protein subunit 2. | Nuclear cap-binding complex large subunit. | 0.999 |
SJAG_01064 | SJAG_04601 | B6JXD6 | B6K794 | Nuclear cap-binding protein subunit 2. | Poly(A) binding protein Pab2. | 0.947 |
SJAG_01064 | SJAG_16455 | B6JXD6 | T0S321 | Nuclear cap-binding protein subunit 2. | Uncharacterized protein. | 0.651 |
SJAG_02382 | SJAG_00456 | B6K2B4 | B6JVP1 | ATP-dependent RNA helicase DOB1. | Uncharacterized protein. | 0.767 |
SJAG_02382 | SJAG_01064 | B6K2B4 | B6JXD6 | ATP-dependent RNA helicase DOB1. | Nuclear cap-binding protein subunit 2. | 0.659 |
SJAG_02382 | SJAG_02622 | B6K2B4 | B6K0R3 | ATP-dependent RNA helicase DOB1. | YTH family protein Mmi1. | 0.817 |
SJAG_02382 | SJAG_02720 | B6K2B4 | B6K102 | ATP-dependent RNA helicase DOB1. | Poly(A) polymerase; Polymerase that creates the 3'-poly(A) tail of mRNA's. | 0.812 |
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