STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_0408826S proteasome regulatory subunit RPN2; Acts as a regulatory subunit of the 26S proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins. (963 aa)    
Predicted Functional Partners:
SJAG_02900
19S proteasome regulatory subunit Rpn11.
   
 0.999
SJAG_03638
26S proteasome regulatory subunit RPN1; Acts as a regulatory subunit of the 26 proteasome which is involved in the ATP-dependent degradation of ubiquitinated proteins.
   
0.999
SJAG_00738
19S proteasome regulatory subunit Rpn6.
   
 0.998
SJAG_00762
19S proteasome regulatory subunit Rpn8.
   
 0.998
SJAG_01489
19S proteasome regulatory subunit Rpt1; Belongs to the AAA ATPase family.
   
 0.998
SJAG_01131
19S proteasome regulatory subunit Rpt6; Belongs to the AAA ATPase family.
   
 0.998
SJAG_03321
19S proteasome regulatory subunit Rpn502.
   
 0.998
SJAG_00712
19S proteasome regulatory subunit Rpt2; Belongs to the AAA ATPase family.
   
 0.997
SJAG_01544
19S proteasome regulatory subunit Rpt5; Belongs to the AAA ATPase family.
   
 0.997
SJAG_02992
19S proteasome regulatory subunit Rpn10.
   
 0.997
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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