STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_04221Sorting nexin Snx12. (1002 aa)    
Predicted Functional Partners:
SJAG_04822
PXA domain-containing protein Pxa1.
   
 
 0.792
SJAG_02492
Fungal protein.
      
 0.760
SJAG_03446
Nexin_C domain-containing protein.
      
 0.732
TRM8
tRNA (guanine-N(7)-)-methyltransferase; Catalyzes the formation of N(7)-methylguanine at position 46 (m7G46) in tRNA.
 
      0.662
SJAG_02728
Fungal protein.
      
 0.643
SJAG_01166
RINT1 family protein.
   
 
  0.534
SJAG_01388
Cell polarity factor Rax2.
    
  0.529
SJAG_01360
HECT-type ubiquitin-protein ligase Pub2.
    
  0.529
SJAG_03546
Transcription factor tfiiic complex subunit sfc9.
    
  0.529
SJAG_03970
E3 ubiquitin-protein ligase.
    
  0.529
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.