STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_04341DNA replication pre-initiation complex subunit Sld3. (682 aa)    
Predicted Functional Partners:
SJAG_02098
BRCT domain-containing protein Rad4.
    
 0.999
SJAG_00327
DNA replication pre-initiation complex subunit Cdc45.
    
 
 0.936
SJAG_02348
DNA helicase; Belongs to the MCM family.
    
 
 0.864
SJAG_00857
DNA helicase; Belongs to the MCM family.
    
 
 0.825
SJAG_00696
DNA replication complex GINS protein PSF2; Belongs to the GINS2/PSF2 family.
    
 
 0.736
SJAG_03695
Hsk1-Dfp1 kinase complex regulatory subunit Dfp1.
    
 0.724
SJAG_00874
GINS complex subunit Psf1.
    
 
 0.698
SJAG_03090
Spo4-Spo6 kinase complex regulatory subunit Spo6.
    
 0.676
SJAG_04287
CAMK/RAD53 protein kinase Cds1; Belongs to the protein kinase superfamily.
   
 0.674
SJAG_00349
Clr6 histone deacetylase complex subunit Alp13.
    
 0.654
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.