STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_04457CK1/CK1/CK1-D protein kinase Hhp1; Belongs to the protein kinase superfamily. (346 aa)    
Predicted Functional Partners:
SJAG_00344
Ribosome biogenesis protein Tsr1.
    
 0.999
SJAG_00897
Bystin family U3 and U14 snoRNA associated protein.
    
 0.999
SJAG_00955
RNase P subunit.
    
 0.999
SJAG_01618
Atypical/RIO/RIO2 protein kinase.
    
 0.999
SJAG_02046
40S ribosomal protein S7; Belongs to the eukaryotic ribosomal protein eS7 family.
    
  0.999
SJAG_01338
Ribosome biogenesis protein Ltv1.
    
 0.999
SJAG_01366
40S ribosomal protein S26; Belongs to the eukaryotic ribosomal protein eS26 family.
    
 0.999
rps0a
40S ribosomal protein S0-A; Required for the assembly and/or stability of the 40S ribosomal subunit. Required for the processing of the 20S rRNA- precursor to mature 18S rRNA in a late step of the maturation of 40S ribosomal subunits.
    
  0.999
SJAG_03254
40S ribosomal protein S29.
    
  0.999
SJAG_03539
20S-pre-rRNA D-site endonuclease NOB1; Required for the synthesis of 40S ribosome subunits. Has a role in processing 20S pre-rRNA into the mature 18S rRNA, where it is required for cleavage at the 3' end of the mature 18S rRNA (D-site). Accompanies the 20S pre-rRNA from the nucleus to the cytoplasm. Belongs to the NOB1 family.
    
 0.999
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.