STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_04552VPS15 protein kinase Ppk19. (1538 aa)    
Predicted Functional Partners:
SJAG_00114
Phosphatidylinositol 3-kinase VPS34.
   
 0.999
SJAG_01876
Beclin family protein.
    
 0.999
SJAG_02699
Uncharacterized protein.
    
 0.999
SJAG_03403
Autophagy specific phophatidylinositol 3-kinase complex subunit Atg14.
    
 0.999
SJAG_04232
ULK/ULK protein kinase Atg1.
    
 0.983
SJAG_02441
Meiotically upregulated Mug66.
     
 0.899
SJAG_06309
Ubiquitin-like protein ATG12; Ubiquitin-like protein involved in cytoplasm to vacuole transport (Cvt), autophagy vesicles formation, mitophagy, and nucleophagy.
     
 0.899
SJAG_01561
Autophagy-related protein 3.
     
 0.849
SJAG_02414
Autophagy-related protein.
     
 0.843
SJAG_00059
Autophagy protein 5; Involved in cytoplasm to vacuole transport (Cvt) and autophagic vesicle formation.
     
 0.841
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.