Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
LSM3 | SJAG_00559 | B6K4A7 | B6JVZ4 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | Bin3 family protein. | 0.644 |
LSM3 | SJAG_04586 | B6K4A7 | B6K780 | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | F-box protein Pof8. | 0.803 |
SJAG_00352 | SJAG_01457 | B6JVE4 | B6JXZ7 | tRNA specific adenosine deaminase subunit Tad3. | Glutathione-dependent formaldehyde dehydrogenase. | 0.611 |
SJAG_00352 | SJAG_04586 | B6JVE4 | B6K780 | tRNA specific adenosine deaminase subunit Tad3. | F-box protein Pof8. | 0.806 |
SJAG_00352 | SJAG_04627 | B6JVE4 | B6K7B9 | tRNA specific adenosine deaminase subunit Tad3. | Thymidylate synthase. | 0.682 |
SJAG_00352 | SJAG_04726 | B6JVE4 | B6K7L2 | tRNA specific adenosine deaminase subunit Tad3. | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | 0.657 |
SJAG_00559 | LSM3 | B6JVZ4 | B6K4A7 | Bin3 family protein. | U6 snRNA-associated Sm-like protein LSm3; Binds specifically to the 3'-terminal U-tract of U6 snRNA. | 0.644 |
SJAG_00559 | SJAG_04286 | B6JVZ4 | B6K6F4 | Bin3 family protein. | Uncharacterized protein. | 0.824 |
SJAG_00559 | SJAG_04586 | B6JVZ4 | B6K780 | Bin3 family protein. | F-box protein Pof8. | 0.723 |
SJAG_00559 | SJAG_05979 | B6JVZ4 | T0T6J8 | Bin3 family protein. | Telomerase reverse transcriptase; Telomerase is a ribonucleoprotein enzyme essential for the replication of chromosome termini in most eukaryotes. It elongates telomeres. It is a reverse transcriptase that adds simple sequence repeats to chromosome ends by copying a template sequence within the RNA component of the enzyme. | 0.604 |
SJAG_00559 | SJAG_06613 | B6JVZ4 | T0T6H6 | Bin3 family protein. | RNAseP RNAse MRP subunit Pop6. | 0.547 |
SJAG_01457 | SJAG_00352 | B6JXZ7 | B6JVE4 | Glutathione-dependent formaldehyde dehydrogenase. | tRNA specific adenosine deaminase subunit Tad3. | 0.611 |
SJAG_01457 | SJAG_03487 | B6JXZ7 | B6K4D1 | Glutathione-dependent formaldehyde dehydrogenase. | Histone lysine methyltransferase Set7. | 0.611 |
SJAG_01457 | SJAG_04586 | B6JXZ7 | B6K780 | Glutathione-dependent formaldehyde dehydrogenase. | F-box protein Pof8. | 0.611 |
SJAG_01457 | SJAG_04726 | B6JXZ7 | B6K7L2 | Glutathione-dependent formaldehyde dehydrogenase. | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | 0.518 |
SJAG_03487 | SJAG_01457 | B6K4D1 | B6JXZ7 | Histone lysine methyltransferase Set7. | Glutathione-dependent formaldehyde dehydrogenase. | 0.611 |
SJAG_03487 | SJAG_04586 | B6K4D1 | B6K780 | Histone lysine methyltransferase Set7. | F-box protein Pof8. | 0.806 |
SJAG_03487 | SJAG_04627 | B6K4D1 | B6K7B9 | Histone lysine methyltransferase Set7. | Thymidylate synthase. | 0.682 |
SJAG_03487 | SJAG_04726 | B6K4D1 | B6K7L2 | Histone lysine methyltransferase Set7. | Lactoylglutathione lyase; Catalyzes the conversion of hemimercaptal, formed from methylglyoxal and glutathione, to S-lactoylglutathione. | 0.657 |
SJAG_04286 | SJAG_00559 | B6K6F4 | B6JVZ4 | Uncharacterized protein. | Bin3 family protein. | 0.824 |
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