STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_04612Ubiquitin conjugating enzyme Ubc7/UbcP3; Belongs to the ubiquitin-conjugating enzyme family. (166 aa)    
Predicted Functional Partners:
SJAG_05022
Ubiquitin conjugating enzyme Ubc6.
    
0.964
SJAG_05274
Synviolin family ubiquitin-protein ligase Hrd1.
    
 
 0.957
SJAG_00853
Ubiquitin activating enzyme E1; Belongs to the ubiquitin-activating E1 family.
    
 0.942
SJAG_01127
ER membrane protein complex subunit 3; The EMC seems to be required for efficient folding of proteins in the endoplasmic reticulum (ER). Belongs to the EMC3 family.
    
 
 0.924
SJAG_02914
ER membrane protein complex subunit 4; Belongs to the EMC4 family.
    
   0.919
SJAG_00300
Ubiquitin conjugating enzyme Ubc15; Belongs to the ubiquitin-conjugating enzyme family.
  
 
0.905
SJAG_00452
Ubiquitin.
    
 0.894
SJAG_00645
Ubiquitin-like modifier-activating enzyme ATG7; E1-like activating enzyme involved in the 2 ubiquitin-like systems required for cytoplasm to vacuole transport (Cvt) and autophagy. Activates ATG12 for its conjugation with ATG5 and ATG8 for its conjugation with phosphatidylethanolamine. Both systems are needed for the ATG8 association to Cvt vesicles and autophagosomes membranes. Autophagy is essential for maintenance of amino acid levels and protein synthesis under nitrogen starvation. Required for selective autophagic degradation of the nucleus (nucleophagy) as well as for mitophagy wh [...]
 
  
 0.823
SJAG_00878
NEDD8 activating enzyme.
    
 0.823
SJAG_02918
Ubiquitin conjugating enzyme Mms2.
   
 
 0.802
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.