STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_04662UBX domain-containing protein. (271 aa)    
Predicted Functional Partners:
SJAG_03841
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.923
SJAG_03345
AAA family ATPase Cdc48.
    
 0.888
SJAG_02021
UB Xdomain protein Ubx2.
    
 
 0.870
SJAG_00390
Ribosome biogenesis factor recycling AAA family ATPase.
    
 0.861
SJAG_01585
UBA/UAS domain-containing protein Ucp10.
   
 0.861
SJAG_01467
UB Xdomain protein Ubx3.
   
 0.809
SJAG_00681
Derlin; May be involved in the degradation of misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.808
SJAG_04203
Outer membrane ATPase Msp1; Belongs to the AAA ATPase family.
   
 0.759
SJAG_04599
AAA family ATPase Rix7.
    
 0.754
SJAG_00330
Secretory pathway protein Sec18.
   
 0.749
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.