STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_05338Urease accessory protein UreF. (234 aa)    
Predicted Functional Partners:
SJAG_04679
Urease accessory protein UREG.
      
 0.884
SJAG_04896
Urease accessory protein UreD.
  
   
 0.854
SJAG_02082
SUMO conjugating enzyme Hus5; Belongs to the ubiquitin-conjugating enzyme family.
    
  0.733
SJAG_02766
Urease; In the C-terminal section; belongs to the metallo-dependent hydrolases superfamily. Urease alpha subunit family.
      
 0.720
SJAG_01685
Peroxin Pex32.
    
 0.692
SJAG_00508
Methyltransferase implicated in translation.
     
 0.658
SJAG_04830
Nickel/cobalt efflux system; Belongs to the NiCoT transporter (TC 2.A.52) family.
      
 0.584
SJAG_03982
SHREC complex subunit Mit1.
    
 0.582
SJAG_00239
Cell agglutination protein mam3.
    
 0.579
SJAG_00162
Uncharacterized protein.
    
 0.579
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.