STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SJAG_06383Uncharacterized protein. (88 aa)    
Predicted Functional Partners:
SJAG_03558
COPII-coated vesicle component Sec31.
   
 0.924
SJAG_00284
Protein transport protein sec16; Involved in the initiation of assembly of the COPII coat required for the formation of transport vesicles from the endoplasmic reticulum (ER) and the selection of cargo molecules. Also involved in autophagy; Belongs to the SEC16 family.
   
 0.921
SJAG_03907
COPII-coated vesicle component Sec13; Belongs to the WD repeat SEC13 family.
   
 0.910
SJAG_00557
SNARE Sec22; Belongs to the synaptobrevin family.
   
 0.902
SJAG_02349
COPII-coated vesicle component Sfb3.
   
 0.846
SJAG_05344
Sec23/Sec24 family protein.
   
 0.846
SJAG_00072
COPII vesicle coat protein.
   
 0.844
SJAG_05345
Uncharacterized protein.
   
 0.844
SJAG_00867
Fungal protein.
    
 0.818
SJAG_00906
ADP-ribosylation factor Sar1; Belongs to the small GTPase superfamily. SAR1 family.
    
 0.818
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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