STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mef1Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. (763 aa)    
Predicted Functional Partners:
SJAG_04544
Endoribonuclease.
    
 0.999
SJAG_00251
Diphthamide biosynthesis protein Dph4.
  
 0.986
SJAG_00147
Small nuclear ribonucleoprotein Sm D1; Involved in pre-mRNA splicing. Binds snRNA U1, U2, U4 and U5 which contain a highly conserved structural motif called the Sm binding site; Belongs to the snRNP core protein family.
   
 0.908
SJAG_03919
Ribosomal protein L15; Belongs to the eukaryotic ribosomal protein eL15 family.
   
 0.905
SJAG_04475
40S ribosomal protein S2; Belongs to the universal ribosomal protein uS5 family.
 
 0.899
SJAG_03232
Translation termination factor Rrf1.
  
 
 0.886
SJAG_04814
40S ribosomal protein S3; Belongs to the universal ribosomal protein uS3 family.
  
 0.880
SJAG_00749
60S ribosomal protein L35.
  
 0.879
SJAG_02324
Ribosomal protein subunit S16.
  
 
 0.869
SJAG_00921
60S ribosomal protein L26.
  
 0.868
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
Server load: low (10%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.