STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rcf1Respiratory supercomplex factor 1, mitochondrial; Cytochrome c oxidase subunit which plays a role in assembly of respiratory supercomplexes. (106 aa)    
Predicted Functional Partners:
SJAG_01190
Cytochrome c oxidase subunit VIa; Belongs to the cytochrome c oxidase subunit 6A family.
   
 
 0.961
SJAG_00976
Cytochrome c oxidase subunit IV.
   
 
 0.953
SJAG_02397
Peptidase complex beta subunit Qcr1; Belongs to the peptidase M16 family.
   
 
 0.848
SJAG_02504
Cytochrome c oxidase subunit; This protein is one of the nuclear-coded polypeptide chains of cytochrome c oxidase, the terminal oxidase in mitochondrial electron transport.
   
 
 0.782
SJAG_02229
Uncharacterized protein.
   
 
 0.759
SJAG_03337
Fungal protein.
    
 
 0.747
SJAG_00755
Ubiquinol-cytochrome-c reductase complex core protein Qcr2.
   
 
 0.615
SJAG_04641
Peptidase(MPP) complex alpha subunit Mas2; Belongs to the peptidase M16 family.
    
 
 0.571
SJAG_01355
Cytochrome c oxidase subunit VI.
   
  
 0.542
SJAG_02646
Cytochrome c1 Cyt1.
   
 
 0.537
Your Current Organism:
Schizosaccharomyces japonicus
NCBI taxonomy Id: 402676
Other names: S. japonicus yFS275, Schizosaccharomyces japonicus yFS275
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