STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ32720.1Histidine kinase. (345 aa)    
Predicted Functional Partners:
SEJ32745.1
Two component transcriptional regulator, LytTR family.
 
 0.973
SEJ17474.1
Two component transcriptional regulator, LytTR family.
 
  0.916
SEI44953.1
Two component transcriptional regulator, LytTR family.
  
  0.914
SEJ26087.1
Two component transcriptional regulator, LytTR family.
 
 0.887
SEI94845.1
Two component transcriptional regulator, LytTR family.
 
 0.886
SEJ28179.1
Two component transcriptional regulator, LytTR family.
 
  0.790
SEJ33956.1
Two component transcriptional regulator, LytTR family.
 
  0.767
SEI44875.1
Hypothetical protein.
  
  
 
0.493
SEJ32769.1
CubicO group peptidase, beta-lactamase class C family.
       0.478
SEJ32696.1
CarboxypepD_reg-like domain-containing protein.
       0.437
Your Current Organism:
Flavobacterium terrigena
NCBI taxonomy Id: 402734
Other names: DSM 17934, F. terrigena, Flavobacterium terrigena Yoon et al. 2007 emend. Fujii et al. 2014, Flavobacterium terrigena Yoon et al. 2007 emend. Hahnke et al. 2016, KCTC 12761, strain DS-20
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.