STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI45162.1Glycosyltransferase involved in cell wall bisynthesis. (329 aa)    
Predicted Functional Partners:
SEI45116.1
dTDP-4-amino-4,6-dideoxygalactose transaminase; Belongs to the DegT/DnrJ/EryC1 family.
 
    0.743
SEI48444.1
Glycosyl transferase family 2.
  
     0.711
SEJ31000.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.694
SEI45219.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.692
SEI45092.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
  
    0.587
SEI45071.1
L-threonylcarbamoyladenylate synthase; Belongs to the SUA5 family.
       0.565
SEI45133.1
Hypothetical protein.
       0.565
SEI48000.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
  
    0.466
SEI48596.1
ABC-type polysaccharide/polyol phosphate transport system, ATPase component.
 
    0.450
Your Current Organism:
Flavobacterium terrigena
NCBI taxonomy Id: 402734
Other names: DSM 17934, F. terrigena, Flavobacterium terrigena Yoon et al. 2007 emend. Fujii et al. 2014, Flavobacterium terrigena Yoon et al. 2007 emend. Hahnke et al. 2016, KCTC 12761, strain DS-20
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