STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI45219.1Glycosyltransferase involved in cell wall bisynthesis. (270 aa)    
Predicted Functional Partners:
SEI45200.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.855
SEI45182.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    
0.831
SEI45238.1
Hypothetical protein.
     
 0.776
SEI45258.1
Exostosin family protein.
  
    0.767
SEI45359.1
Glycosyltransferase involved in cell wall bisynthesis.
 
     0.706
SEI45162.1
Glycosyltransferase involved in cell wall bisynthesis.
  
     0.692
SEI45314.1
Dolichol-phosphate mannosyltransferase.
 
     0.595
SEJ21789.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
     0.551
SEI45338.1
Protein of unknown function.
  
 
  0.547
SEI45275.1
Lipopolysaccharide kinase (Kdo/WaaP) family protein.
       0.531
Your Current Organism:
Flavobacterium terrigena
NCBI taxonomy Id: 402734
Other names: DSM 17934, F. terrigena, Flavobacterium terrigena Yoon et al. 2007 emend. Fujii et al. 2014, Flavobacterium terrigena Yoon et al. 2007 emend. Hahnke et al. 2016, KCTC 12761, strain DS-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.