Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI47866.1 | SEI59571.1 | SAMN05660918_0840 | SAMN05660918_1070 | Putative hydrolase of the HAD superfamily. | Predicted metalloprotease, contains C-terminal PDZ domain. | 0.480 |
SEI47866.1 | SEI77777.1 | SAMN05660918_0840 | SAMN05660918_1592 | Putative hydrolase of the HAD superfamily. | Periplasmic chaperone for outer membrane proteins Skp. | 0.467 |
SEI59545.1 | SEI59571.1 | SAMN05660918_1069 | SAMN05660918_1070 | TIGR03643 family protein. | Predicted metalloprotease, contains C-terminal PDZ domain. | 0.520 |
SEI59571.1 | SEI47866.1 | SAMN05660918_1070 | SAMN05660918_0840 | Predicted metalloprotease, contains C-terminal PDZ domain. | Putative hydrolase of the HAD superfamily. | 0.480 |
SEI59571.1 | SEI59545.1 | SAMN05660918_1070 | SAMN05660918_1069 | Predicted metalloprotease, contains C-terminal PDZ domain. | TIGR03643 family protein. | 0.520 |
SEI59571.1 | SEI59597.1 | SAMN05660918_1070 | SAMN05660918_1071 | Predicted metalloprotease, contains C-terminal PDZ domain. | Protein of unknown function. | 0.539 |
SEI59571.1 | SEI77777.1 | SAMN05660918_1070 | SAMN05660918_1592 | Predicted metalloprotease, contains C-terminal PDZ domain. | Periplasmic chaperone for outer membrane proteins Skp. | 0.406 |
SEI59571.1 | SEJ01791.1 | SAMN05660918_1070 | SAMN05660918_2168 | Predicted metalloprotease, contains C-terminal PDZ domain. | Por secretion system C-terminal sorting domain-containing protein. | 0.482 |
SEI59571.1 | SEJ16775.1 | SAMN05660918_1070 | SAMN05660918_2519 | Predicted metalloprotease, contains C-terminal PDZ domain. | Hypothetical protein. | 0.439 |
SEI59571.1 | SEJ38032.1 | SAMN05660918_1070 | SAMN05660918_0177 | Predicted metalloprotease, contains C-terminal PDZ domain. | N-terminal double-transmembrane domain-containing protein. | 0.428 |
SEI59597.1 | SEI59571.1 | SAMN05660918_1071 | SAMN05660918_1070 | Protein of unknown function. | Predicted metalloprotease, contains C-terminal PDZ domain. | 0.539 |
SEI77777.1 | SEI47866.1 | SAMN05660918_1592 | SAMN05660918_0840 | Periplasmic chaperone for outer membrane proteins Skp. | Putative hydrolase of the HAD superfamily. | 0.467 |
SEI77777.1 | SEI59571.1 | SAMN05660918_1592 | SAMN05660918_1070 | Periplasmic chaperone for outer membrane proteins Skp. | Predicted metalloprotease, contains C-terminal PDZ domain. | 0.406 |
SEI77777.1 | SEJ01791.1 | SAMN05660918_1592 | SAMN05660918_2168 | Periplasmic chaperone for outer membrane proteins Skp. | Por secretion system C-terminal sorting domain-containing protein. | 0.545 |
SEJ01791.1 | SEI59571.1 | SAMN05660918_2168 | SAMN05660918_1070 | Por secretion system C-terminal sorting domain-containing protein. | Predicted metalloprotease, contains C-terminal PDZ domain. | 0.482 |
SEJ01791.1 | SEI77777.1 | SAMN05660918_2168 | SAMN05660918_1592 | Por secretion system C-terminal sorting domain-containing protein. | Periplasmic chaperone for outer membrane proteins Skp. | 0.545 |
SEJ01791.1 | SEJ16775.1 | SAMN05660918_2168 | SAMN05660918_2519 | Por secretion system C-terminal sorting domain-containing protein. | Hypothetical protein. | 0.428 |
SEJ16775.1 | SEI59571.1 | SAMN05660918_2519 | SAMN05660918_1070 | Hypothetical protein. | Predicted metalloprotease, contains C-terminal PDZ domain. | 0.439 |
SEJ16775.1 | SEJ01791.1 | SAMN05660918_2519 | SAMN05660918_2168 | Hypothetical protein. | Por secretion system C-terminal sorting domain-containing protein. | 0.428 |
SEJ38032.1 | SEI59571.1 | SAMN05660918_0177 | SAMN05660918_1070 | N-terminal double-transmembrane domain-containing protein. | Predicted metalloprotease, contains C-terminal PDZ domain. | 0.428 |