STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI64487.1Protein involved in gliding motility GldM. (508 aa)    
Predicted Functional Partners:
SEI64456.1
Protein involved in gliding motility GldL.
 
 
 
 0.999
SEI64515.1
Protein involved in gliding motility GldN.
 
   
 0.976
SEI64417.1
Protein involved in gliding motility GldK.
 
   
 0.936
SEI99312.1
Protein involved in gliding motility SprA.
  
   
 0.871
SEI70584.1
Tetratricopeptide repeat-containing protein.
  
   
 0.855
SEI66350.1
Outer membrane protein beta-barrel domain-containing protein.
  
   
 0.821
SEI49716.1
Protein involved in gliding motility GldJ.
 
   
 0.799
SEJ25483.1
Gliding motility-associated lipoprotein GldD.
  
   
 0.784
SEI47365.1
Protein involved in gliding motility GldI.
  
   
 0.751
SEJ21221.1
Gliding motility-associated lipoprotein GldB.
  
   
 0.751
Your Current Organism:
Flavobacterium terrigena
NCBI taxonomy Id: 402734
Other names: DSM 17934, F. terrigena, Flavobacterium terrigena Yoon et al. 2007 emend. Fujii et al. 2014, Flavobacterium terrigena Yoon et al. 2007 emend. Hahnke et al. 2016, KCTC 12761, strain DS-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.