Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI38195.1 | SEI81517.1 | SAMN05660918_0230 | SAMN05660918_1707 | Aspartate aminotransferase. | Pyridoxal-dependent decarboxylase conserved domain-containing protein. | 0.855 |
SEI38195.1 | SEJ00731.1 | SAMN05660918_0230 | SAMN05660918_2130 | Aspartate aminotransferase. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.419 |
SEI38195.1 | SEJ01979.1 | SAMN05660918_0230 | SAMN05660918_2174 | Aspartate aminotransferase. | L-asparaginase. | 0.910 |
SEI38195.1 | SEJ28114.1 | SAMN05660918_0230 | SAMN05660918_2858 | Aspartate aminotransferase. | Aspartate aminotransferase. | 0.919 |
SEI38195.1 | panD | SAMN05660918_0230 | SAMN05660918_1441 | Aspartate aminotransferase. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.907 |
SEI38195.1 | purA | SAMN05660918_0230 | SAMN05660918_0620 | Aspartate aminotransferase. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.913 |
SEI69501.1 | SEI69526.1 | SAMN05660918_1442 | SAMN05660918_1443 | Hypothetical protein. | Hypothetical protein. | 0.704 |
SEI69501.1 | panC | SAMN05660918_1442 | SAMN05660918_1440 | Hypothetical protein. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.740 |
SEI69501.1 | panD | SAMN05660918_1442 | SAMN05660918_1441 | Hypothetical protein. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.831 |
SEI69526.1 | SEI69501.1 | SAMN05660918_1443 | SAMN05660918_1442 | Hypothetical protein. | Hypothetical protein. | 0.704 |
SEI69526.1 | panC | SAMN05660918_1443 | SAMN05660918_1440 | Hypothetical protein. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.615 |
SEI69526.1 | panD | SAMN05660918_1443 | SAMN05660918_1441 | Hypothetical protein. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.700 |
SEI81517.1 | SEI38195.1 | SAMN05660918_1707 | SAMN05660918_0230 | Pyridoxal-dependent decarboxylase conserved domain-containing protein. | Aspartate aminotransferase. | 0.855 |
SEI81517.1 | SEJ00731.1 | SAMN05660918_1707 | SAMN05660918_2130 | Pyridoxal-dependent decarboxylase conserved domain-containing protein. | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | 0.875 |
SEI81517.1 | SEJ01979.1 | SAMN05660918_1707 | SAMN05660918_2174 | Pyridoxal-dependent decarboxylase conserved domain-containing protein. | L-asparaginase. | 0.816 |
SEI81517.1 | SEJ28114.1 | SAMN05660918_1707 | SAMN05660918_2858 | Pyridoxal-dependent decarboxylase conserved domain-containing protein. | Aspartate aminotransferase. | 0.855 |
SEI81517.1 | panC | SAMN05660918_1707 | SAMN05660918_1440 | Pyridoxal-dependent decarboxylase conserved domain-containing protein. | Pantoate--beta-alanine ligase; Catalyzes the condensation of pantoate with beta-alanine in an ATP-dependent reaction via a pantoyl-adenylate intermediate. Belongs to the pantothenate synthetase family. | 0.893 |
SEI81517.1 | panD | SAMN05660918_1707 | SAMN05660918_1441 | Pyridoxal-dependent decarboxylase conserved domain-containing protein. | L-aspartate 1-decarboxylase; Catalyzes the pyruvoyl-dependent decarboxylation of aspartate to produce beta-alanine. | 0.850 |
SEI81517.1 | purA | SAMN05660918_1707 | SAMN05660918_0620 | Pyridoxal-dependent decarboxylase conserved domain-containing protein. | Adenylosuccinate synthetase; Plays an important role in the de novo pathway of purine nucleotide biosynthesis. Catalyzes the first committed step in the biosynthesis of AMP from IMP; Belongs to the adenylosuccinate synthetase family. | 0.797 |
SEJ00731.1 | SEI38195.1 | SAMN05660918_2130 | SAMN05660918_0230 | Aldehyde dehydrogenase (NAD+); Belongs to the aldehyde dehydrogenase family. | Aspartate aminotransferase. | 0.419 |
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