STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI72459.1Hypothetical protein. (1105 aa)    
Predicted Functional Partners:
SEI58300.1
Hypothetical protein.
  
     0.774
SEJ18607.1
Hypothetical protein.
  
     0.774
SEI47981.1
Hypothetical protein.
   
   0.773
SEI39166.1
Hypothetical protein.
  
     0.772
SEI49696.1
Peptidase family C25.
  
     0.772
SEI77259.1
Two component regulator propeller.
  
     0.771
SEI66919.1
Hypothetical protein.
  
     0.764
SEJ29987.1
TonB-dependent Receptor Plug Domain.
  
     0.737
SEJ35320.1
Hypothetical protein.
  
     0.729
SEI44427.1
Polysaccharide transporter, PST family.
  
     0.717
Your Current Organism:
Flavobacterium terrigena
NCBI taxonomy Id: 402734
Other names: DSM 17934, F. terrigena, Flavobacterium terrigena Yoon et al. 2007 emend. Fujii et al. 2014, Flavobacterium terrigena Yoon et al. 2007 emend. Hahnke et al. 2016, KCTC 12761, strain DS-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.