STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI77583.1Protein of unknown function. (325 aa)    
Predicted Functional Partners:
SEJ20262.1
Cell division protein FtsQ.
 
 
 0.830
SEI77608.1
Membrane-bound lytic murein transglycosylase D.
 
 
 0.828
SEI95532.1
Cyanophycin synthetase; Belongs to the MurCDEF family.
  
 
 0.787
SEI77560.1
ElaA protein.
       0.779
SEI58594.1
Hypothetical protein.
  
  
 0.711
SEI80743.1
Penicillin-binding protein 1A.
   
 0.635
mtgA
Monofunctional biosynthetic peptidoglycan transglycosylase; Peptidoglycan polymerase that catalyzes glycan chain elongation from lipid-linked precursors; Belongs to the glycosyltransferase 51 family.
    
 0.619
SEI64267.1
Lipopolysaccharide-assembly.
 
     0.611
SEI67123.1
Rod shape-determining protein MreC.
  
 
 0.608
SEI39166.1
Hypothetical protein.
   
 
 0.583
Your Current Organism:
Flavobacterium terrigena
NCBI taxonomy Id: 402734
Other names: DSM 17934, F. terrigena, Flavobacterium terrigena Yoon et al. 2007 emend. Fujii et al. 2014, Flavobacterium terrigena Yoon et al. 2007 emend. Hahnke et al. 2016, KCTC 12761, strain DS-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.