STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI79927.1Glycosyl transferase family 2. (254 aa)    
Predicted Functional Partners:
SEI79891.1
Putative colanic acid biosysnthesis UDP-glucose lipid carrier transferase.
    0.846
SEI79861.1
dTDP-glucose 4,6-dehydratase.
 
    0.677
SEI79834.1
O-Antigen ligase.
  
  
 0.584
SEI48831.1
Sugar O-acyltransferase, sialic acid O-acetyltransferase NeuD family.
  
 0.562
SEI48000.1
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase.
 
    0.520
SEJ21789.1
UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
  
     0.480
SEI45200.1
Glycosyltransferase involved in cell wall bisynthesis.
 
    0.457
Your Current Organism:
Flavobacterium terrigena
NCBI taxonomy Id: 402734
Other names: DSM 17934, F. terrigena, Flavobacterium terrigena Yoon et al. 2007 emend. Fujii et al. 2014, Flavobacterium terrigena Yoon et al. 2007 emend. Hahnke et al. 2016, KCTC 12761, strain DS-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.