Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI59420.1 | SEI89354.1 | SAMN05660918_1064 | SAMN05660918_1840 | Outer membrane receptor proteins, mostly Fe transport. | Hypothetical protein. | 0.403 |
SEI89227.1 | SEI89260.1 | SAMN05660918_1836 | SAMN05660918_1837 | Hypothetical protein. | Hypothetical protein. | 0.762 |
SEI89227.1 | SEI89323.1 | SAMN05660918_1836 | SAMN05660918_1839 | Hypothetical protein. | Thioredoxin-like. | 0.538 |
SEI89227.1 | SEI89354.1 | SAMN05660918_1836 | SAMN05660918_1840 | Hypothetical protein. | Hypothetical protein. | 0.492 |
SEI89227.1 | tpiA | SAMN05660918_1836 | SAMN05660918_1838 | Hypothetical protein. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.762 |
SEI89260.1 | SEI89227.1 | SAMN05660918_1837 | SAMN05660918_1836 | Hypothetical protein. | Hypothetical protein. | 0.762 |
SEI89260.1 | SEI89323.1 | SAMN05660918_1837 | SAMN05660918_1839 | Hypothetical protein. | Thioredoxin-like. | 0.545 |
SEI89260.1 | SEI89354.1 | SAMN05660918_1837 | SAMN05660918_1840 | Hypothetical protein. | Hypothetical protein. | 0.499 |
SEI89260.1 | tpiA | SAMN05660918_1837 | SAMN05660918_1838 | Hypothetical protein. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.773 |
SEI89323.1 | SEI89227.1 | SAMN05660918_1839 | SAMN05660918_1836 | Thioredoxin-like. | Hypothetical protein. | 0.538 |
SEI89323.1 | SEI89260.1 | SAMN05660918_1839 | SAMN05660918_1837 | Thioredoxin-like. | Hypothetical protein. | 0.545 |
SEI89323.1 | SEI89354.1 | SAMN05660918_1839 | SAMN05660918_1840 | Thioredoxin-like. | Hypothetical protein. | 0.727 |
SEI89323.1 | SEI89387.1 | SAMN05660918_1839 | SAMN05660918_1841 | Thioredoxin-like. | Protein of unknown function. | 0.442 |
SEI89323.1 | tpiA | SAMN05660918_1839 | SAMN05660918_1838 | Thioredoxin-like. | Triosephosphate isomerase; Involved in the gluconeogenesis. Catalyzes stereospecifically the conversion of dihydroxyacetone phosphate (DHAP) to D- glyceraldehyde-3-phosphate (G3P); Belongs to the triosephosphate isomerase family. | 0.656 |
SEI89354.1 | SEI59420.1 | SAMN05660918_1840 | SAMN05660918_1064 | Hypothetical protein. | Outer membrane receptor proteins, mostly Fe transport. | 0.403 |
SEI89354.1 | SEI89227.1 | SAMN05660918_1840 | SAMN05660918_1836 | Hypothetical protein. | Hypothetical protein. | 0.492 |
SEI89354.1 | SEI89260.1 | SAMN05660918_1840 | SAMN05660918_1837 | Hypothetical protein. | Hypothetical protein. | 0.499 |
SEI89354.1 | SEI89323.1 | SAMN05660918_1840 | SAMN05660918_1839 | Hypothetical protein. | Thioredoxin-like. | 0.727 |
SEI89354.1 | SEI89387.1 | SAMN05660918_1840 | SAMN05660918_1841 | Hypothetical protein. | Protein of unknown function. | 0.509 |
SEI89354.1 | SEI89420.1 | SAMN05660918_1840 | SAMN05660918_1842 | Hypothetical protein. | Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives. | 0.400 |
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