STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI90145.1FixH protein. (148 aa)    
Predicted Functional Partners:
SEI90293.1
Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family.
 
 
 0.999
SEI90176.1
Cytochrome c oxidase accessory protein FixG.
 
  
 0.961
SEI90206.1
Cytochrome c oxidase cbb3-type subunit 3.
 
 
 0.956
SEI90328.1
Cytochrome oxidase maturation protein, cbb3-type; Manually curated.
 
  
 0.904
SEI90264.1
Hypothetical protein.
 
 
 0.886
SEI90118.1
Hypothetical protein.
 
     0.856
SEI90369.1
Cu+-exporting ATPase.
 
   
 0.853
SEI99759.1
Cytochrome c7.
  
   0.741
SEI99630.1
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit.
 
 
 0.648
SEI99656.1
Quinol:cytochrome c oxidoreductase membrane protein.
 
 
 0.641
Your Current Organism:
Flavobacterium terrigena
NCBI taxonomy Id: 402734
Other names: DSM 17934, F. terrigena, Flavobacterium terrigena Yoon et al. 2007 emend. Fujii et al. 2014, Flavobacterium terrigena Yoon et al. 2007 emend. Hahnke et al. 2016, KCTC 12761, strain DS-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.