Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI46356.1 | SEI46419.1 | SAMN05660918_0711 | SAMN05660918_0715 | Adenosylcobinamide kinase. | Iron complex transport system ATP-binding protein. | 0.714 |
SEI46356.1 | SEI92105.1 | SAMN05660918_0711 | SAMN05660918_1924 | Adenosylcobinamide kinase. | cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.920 |
SEI46356.1 | cobS | SAMN05660918_0711 | SAMN05660918_0708 | Adenosylcobinamide kinase. | Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.996 |
SEI46356.1 | hisC | SAMN05660918_0711 | SAMN05660918_2326 | Adenosylcobinamide kinase. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.611 |
SEI46419.1 | SEI46356.1 | SAMN05660918_0715 | SAMN05660918_0711 | Iron complex transport system ATP-binding protein. | Adenosylcobinamide kinase. | 0.714 |
SEI46419.1 | SEI92105.1 | SAMN05660918_0715 | SAMN05660918_1924 | Iron complex transport system ATP-binding protein. | cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.455 |
SEI46419.1 | cobS | SAMN05660918_0715 | SAMN05660918_0708 | Iron complex transport system ATP-binding protein. | Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.449 |
SEI92066.1 | SEI92105.1 | SAMN05660918_1923 | SAMN05660918_1924 | Protein of unknown function. | cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.553 |
SEI92066.1 | SEI92139.1 | SAMN05660918_1923 | SAMN05660918_1925 | Protein of unknown function. | Tellurite resistance protein TerC. | 0.473 |
SEI92105.1 | SEI46356.1 | SAMN05660918_1924 | SAMN05660918_0711 | cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | Adenosylcobinamide kinase. | 0.920 |
SEI92105.1 | SEI46419.1 | SAMN05660918_1924 | SAMN05660918_0715 | cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | Iron complex transport system ATP-binding protein. | 0.455 |
SEI92105.1 | SEI92066.1 | SAMN05660918_1924 | SAMN05660918_1923 | cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | Protein of unknown function. | 0.553 |
SEI92105.1 | SEI92139.1 | SAMN05660918_1924 | SAMN05660918_1925 | cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | Tellurite resistance protein TerC. | 0.773 |
SEI92105.1 | SEI92163.1 | SAMN05660918_1924 | SAMN05660918_1926 | cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | Glutamine synthetase. | 0.444 |
SEI92105.1 | cobS | SAMN05660918_1924 | SAMN05660918_0708 | cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | Cobalamin-5'-phosphate synthase; Joins adenosylcobinamide-GDP and alpha-ribazole to generate adenosylcobalamin (Ado-cobalamin). Also synthesizes adenosylcobalamin 5'-phosphate from adenosylcobinamide-GDP and alpha-ribazole 5'- phosphate; Belongs to the CobS family. | 0.921 |
SEI92105.1 | hisC | SAMN05660918_1924 | SAMN05660918_2326 | cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | Histidinol-phosphate aminotransferase; Belongs to the class-II pyridoxal-phosphate-dependent aminotransferase family. Histidinol-phosphate aminotransferase subfamily. | 0.456 |
SEI92139.1 | SEI92066.1 | SAMN05660918_1925 | SAMN05660918_1923 | Tellurite resistance protein TerC. | Protein of unknown function. | 0.473 |
SEI92139.1 | SEI92105.1 | SAMN05660918_1925 | SAMN05660918_1924 | Tellurite resistance protein TerC. | cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.773 |
SEI92139.1 | SEI92163.1 | SAMN05660918_1925 | SAMN05660918_1926 | Tellurite resistance protein TerC. | Glutamine synthetase. | 0.444 |
SEI92163.1 | SEI92105.1 | SAMN05660918_1926 | SAMN05660918_1924 | Glutamine synthetase. | cob(I)alamin adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family. | 0.444 |
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