STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEI99683.1Quinol:cytochrome c oxidoreductase quinone-binding subunit 1. (478 aa)    
Predicted Functional Partners:
SEI99605.1
Hypothetical protein.
 
 
 
 0.999
SEI99630.1
Quinol:cytochrome c oxidoreductase monoheme cytochrome subunit.
 
 
  0.999
SEI99656.1
Quinol:cytochrome c oxidoreductase membrane protein.
 
 
  0.999
SEI99710.1
Quinol:cytochrome c oxidoreductase iron-sulfur protein precursor.
 
 0.999
SEI99759.1
Cytochrome c7.
 
 
 0.996
tuf
Translation elongation factor 1A (EF-1A/EF-Tu); This protein promotes the GTP-dependent binding of aminoacyl- tRNA to the A-site of ribosomes during protein biosynthesis.
   
 
 0.835
SEI46505.1
Conserved hypothetical protein, HNE_0200 family.
 
 
  0.762
SEI99551.1
Cytochrome c oxidase subunit 2.
     
 0.746
SEI99525.1
Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family.
     
 0.740
SEI46623.1
Hypothetical protein.
   
  0.722
Your Current Organism:
Flavobacterium terrigena
NCBI taxonomy Id: 402734
Other names: DSM 17934, F. terrigena, Flavobacterium terrigena Yoon et al. 2007 emend. Fujii et al. 2014, Flavobacterium terrigena Yoon et al. 2007 emend. Hahnke et al. 2016, KCTC 12761, strain DS-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.