Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI90293.1 | SEI98991.1 | SAMN05660918_1870 | SAMN05660918_2068 | Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family. | Cytochrome c oxidase subunit 3. | 0.941 |
SEI90293.1 | SEI99040.1 | SAMN05660918_1870 | SAMN05660918_2069 | Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family. | Cytochrome c oxidase subunit 3. | 0.941 |
SEI90293.1 | SEI99525.1 | SAMN05660918_1870 | SAMN05660918_2087 | Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family. | Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.944 |
SEI90293.1 | SEI99551.1 | SAMN05660918_1870 | SAMN05660918_2088 | Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family. | Cytochrome c oxidase subunit 2. | 0.941 |
SEI90293.1 | SEI99759.1 | SAMN05660918_1870 | SAMN05660918_2094 | Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family. | Cytochrome c7. | 0.999 |
SEI90293.1 | SEJ02956.1 | SAMN05660918_1870 | SAMN05660918_2206 | Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family. | Hypothetical protein. | 0.999 |
SEI90293.1 | SEJ19950.1 | SAMN05660918_1870 | SAMN05660918_2619 | Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family. | Hypothetical protein. | 0.832 |
SEI90293.1 | SEJ26911.1 | SAMN05660918_1870 | SAMN05660918_2812 | Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family. | Rieske [2Fe-2S] domain-containing protein. | 0.999 |
SEI98991.1 | SEI90293.1 | SAMN05660918_2068 | SAMN05660918_1870 | Cytochrome c oxidase subunit 3. | Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family. | 0.941 |
SEI98991.1 | SEI99040.1 | SAMN05660918_2068 | SAMN05660918_2069 | Cytochrome c oxidase subunit 3. | Cytochrome c oxidase subunit 3. | 0.993 |
SEI98991.1 | SEI99525.1 | SAMN05660918_2068 | SAMN05660918_2087 | Cytochrome c oxidase subunit 3. | Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.998 |
SEI98991.1 | SEI99551.1 | SAMN05660918_2068 | SAMN05660918_2088 | Cytochrome c oxidase subunit 3. | Cytochrome c oxidase subunit 2. | 0.998 |
SEI98991.1 | SEI99759.1 | SAMN05660918_2068 | SAMN05660918_2094 | Cytochrome c oxidase subunit 3. | Cytochrome c7. | 0.870 |
SEI98991.1 | SEJ02956.1 | SAMN05660918_2068 | SAMN05660918_2206 | Cytochrome c oxidase subunit 3. | Hypothetical protein. | 0.787 |
SEI98991.1 | SEJ19950.1 | SAMN05660918_2068 | SAMN05660918_2619 | Cytochrome c oxidase subunit 3. | Hypothetical protein. | 0.430 |
SEI98991.1 | SEJ26911.1 | SAMN05660918_2068 | SAMN05660918_2812 | Cytochrome c oxidase subunit 3. | Rieske [2Fe-2S] domain-containing protein. | 0.948 |
SEI99040.1 | SEI90293.1 | SAMN05660918_2069 | SAMN05660918_1870 | Cytochrome c oxidase subunit 3. | Cytochrome c oxidase cbb3-type subunit I/II; Belongs to the heme-copper respiratory oxidase family. | 0.941 |
SEI99040.1 | SEI98991.1 | SAMN05660918_2069 | SAMN05660918_2068 | Cytochrome c oxidase subunit 3. | Cytochrome c oxidase subunit 3. | 0.993 |
SEI99040.1 | SEI99525.1 | SAMN05660918_2069 | SAMN05660918_2087 | Cytochrome c oxidase subunit 3. | Cytochrome c oxidase subunit 1; Belongs to the heme-copper respiratory oxidase family. | 0.998 |
SEI99040.1 | SEI99551.1 | SAMN05660918_2069 | SAMN05660918_2088 | Cytochrome c oxidase subunit 3. | Cytochrome c oxidase subunit 2. | 0.998 |
page 1 of 5