STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ10422.1Hypothetical protein. (160 aa)    
Predicted Functional Partners:
SEJ10398.1
Cysteine-rich domain-containing protein.
       0.831
SEJ10346.1
4Fe-4S dicluster domain-containing protein.
 
     0.750
SEI76958.1
Protein of unknown function.
  
     0.728
SEJ04781.1
Hypothetical protein.
  
     0.725
SEJ21244.1
Gliding motility-associated protein GldC.
  
     0.717
SEJ10375.1
Hypothetical protein.
       0.704
SEJ12948.1
Protein of unknown function.
  
     0.698
SEJ10457.1
Beta-glucosidase.
       0.671
SEJ10318.1
phospholipid/cholesterol/gamma-HCH transport system substrate-binding protein.
       0.663
SEJ30601.1
Acyl-CoA reductase (LuxC).
  
     0.584
Your Current Organism:
Flavobacterium terrigena
NCBI taxonomy Id: 402734
Other names: DSM 17934, F. terrigena, Flavobacterium terrigena Yoon et al. 2007 emend. Fujii et al. 2014, Flavobacterium terrigena Yoon et al. 2007 emend. Hahnke et al. 2016, KCTC 12761, strain DS-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.