STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SEJ12440.1Septum formation protein; Nucleoside triphosphate pyrophosphatase that hydrolyzes dTTP and UTP. May have a dual role in cell division arrest and in preventing the incorporation of modified nucleotides into cellular nucleic acids. (193 aa)    
Predicted Functional Partners:
SEJ12470.1
4-hydroxybenzoate polyprenyltransferase.
       0.795
SEJ12498.1
3-deoxy-D-manno-octulosonate 8-phosphate phosphatase (KDO 8-P phosphatase).
       0.763
SEJ12525.1
Predicted oxidoreductase, contains short-chain dehydrogenase (SDR) and DUF2520 domains.
       0.763
SEI38451.1
Hypothetical protein; Pyridoxal 5'-phosphate (PLP)-binding protein, which is involved in PLP homeostasis; Belongs to the pyridoxal phosphate-binding protein YggS/PROSC family.
    0.751
SEI62531.1
RadC-like JAB domain-containing protein.
  
  
 0.667
SEI71224.1
DNA repair protein radc.
  
  
 0.667
SEJ18959.1
DNA repair protein RadC; Belongs to the UPF0758 family.
  
  
 0.667
SEI67123.1
Rod shape-determining protein MreC.
  
  
 0.613
SEI81116.1
Tryptophan 2,3-dioxygenase apoenzyme.
    
   0.562
SEJ12409.1
Pyrimidine operon attenuation protein / uracil phosphoribosyltransferase.
       0.562
Your Current Organism:
Flavobacterium terrigena
NCBI taxonomy Id: 402734
Other names: DSM 17934, F. terrigena, Flavobacterium terrigena Yoon et al. 2007 emend. Fujii et al. 2014, Flavobacterium terrigena Yoon et al. 2007 emend. Hahnke et al. 2016, KCTC 12761, strain DS-20
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.