Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
SEI38067.1 | SEJ13251.1 | SAMN05660918_0220 | SAMN05660918_2484 | Hypothetical protein. | Putative zinc-or iron-chelating domain-containing protein. | 0.550 |
SEI38067.1 | SEJ13320.1 | SAMN05660918_0220 | SAMN05660918_2485 | Hypothetical protein. | Hypothetical protein. | 0.547 |
SEI49696.1 | SEJ13251.1 | SAMN05660918_0924 | SAMN05660918_2484 | Peptidase family C25. | Putative zinc-or iron-chelating domain-containing protein. | 0.463 |
SEI49696.1 | SEJ13320.1 | SAMN05660918_0924 | SAMN05660918_2485 | Peptidase family C25. | Hypothetical protein. | 0.463 |
SEI87553.1 | SEJ13251.1 | SAMN05660918_1781 | SAMN05660918_2484 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | Putative zinc-or iron-chelating domain-containing protein. | 0.471 |
SEI87553.1 | SEJ13320.1 | SAMN05660918_1781 | SAMN05660918_2485 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | Hypothetical protein. | 0.471 |
SEI87553.1 | ribB | SAMN05660918_1781 | SAMN05660918_0401 | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.465 |
SEJ02513.1 | SEJ13251.1 | SAMN05660918_2191 | SAMN05660918_2484 | Hypothetical protein. | Putative zinc-or iron-chelating domain-containing protein. | 0.437 |
SEJ02513.1 | SEJ13320.1 | SAMN05660918_2191 | SAMN05660918_2485 | Hypothetical protein. | Hypothetical protein. | 0.429 |
SEJ13251.1 | SEI38067.1 | SAMN05660918_2484 | SAMN05660918_0220 | Putative zinc-or iron-chelating domain-containing protein. | Hypothetical protein. | 0.550 |
SEJ13251.1 | SEI49696.1 | SAMN05660918_2484 | SAMN05660918_0924 | Putative zinc-or iron-chelating domain-containing protein. | Peptidase family C25. | 0.463 |
SEJ13251.1 | SEI87553.1 | SAMN05660918_2484 | SAMN05660918_1781 | Putative zinc-or iron-chelating domain-containing protein. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.471 |
SEJ13251.1 | SEJ02513.1 | SAMN05660918_2484 | SAMN05660918_2191 | Putative zinc-or iron-chelating domain-containing protein. | Hypothetical protein. | 0.437 |
SEJ13251.1 | SEJ13320.1 | SAMN05660918_2484 | SAMN05660918_2485 | Putative zinc-or iron-chelating domain-containing protein. | Hypothetical protein. | 0.483 |
SEJ13251.1 | ribB | SAMN05660918_2484 | SAMN05660918_0401 | Putative zinc-or iron-chelating domain-containing protein. | 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family. | 0.428 |
SEJ13320.1 | SEI38067.1 | SAMN05660918_2485 | SAMN05660918_0220 | Hypothetical protein. | Hypothetical protein. | 0.547 |
SEJ13320.1 | SEI49696.1 | SAMN05660918_2485 | SAMN05660918_0924 | Hypothetical protein. | Peptidase family C25. | 0.463 |
SEJ13320.1 | SEI87553.1 | SAMN05660918_2485 | SAMN05660918_1781 | Hypothetical protein. | Formylglycine-generating enzyme, required for sulfatase activity, contains SUMF1/FGE domain. | 0.471 |
SEJ13320.1 | SEJ02513.1 | SAMN05660918_2485 | SAMN05660918_2191 | Hypothetical protein. | Hypothetical protein. | 0.429 |
SEJ13320.1 | SEJ13251.1 | SAMN05660918_2485 | SAMN05660918_2484 | Hypothetical protein. | Putative zinc-or iron-chelating domain-containing protein. | 0.483 |
page 1 of 2